- Phytopathology, Molecular and Cell Biology, Microbiology, Genomics, Genome annotation, Next-Generation Sequencing datasets (DNA-Seq, RNA-Seq).
- Analytical chemistry: Extraction, analysis and purification technologies (LC-MS, HR-ESI-MS, Flash chromatography, preparative HPLC)
- Robin, G.P., Kleemann, J., Neumann, U., Cabre, L., Dallery, J.F., Lapalu, N., and O’Connell, R.J. (2018). Subcellular localization screening of Colletotrichum higginsianum effector candidates identifies fungal proteins targeted to plant peroxisomes, Golgi bodies, and microtubules. Frontiers in Plant Science 9:562. DOI: 10.3389/fpls.2018.00562
- Dallery, J.F., Lapalu, N., Zampounis, A., Pigné, S., Luyten, I., Amselem, J., Wittenberg, A.H.J., Zhou, S.G., De Queiroz, M.V., Robin, G.P., Auger, A., Hainaut, M., Henrissat, B., Kim, K.T., Lee, Y.H., Lespinet, O., Schwartz, D.C., Thon, M.R., and O’Connell, R.J. (2017). Gapless genome assembly of Colletotrichum higginsianum reveals chromosome structure and association of transposable elements with secondary metabolite gene clusters. BMC Genomics 18:667. DOI: 10.1186/s12864-017-4083-x
- Zampounis, A., Pigné, S., Dallery, J.F., Wittenberg, A.H.J., Zhou, S., Schwartz, D.C., Thon, M.R., and O’Connell, R.J. (2016). Genome sequence and Annotation of Colletotrichum higginsianum, a causal agent of crucifer anthracnose disease. Genome Announcements 4(4):e00821-16. DOI: 10.1128/genomeA.00821-16
- Hacquard, S., Kracher, B., Hiruma, K., Munch, P.C., Garrido-Oter, R., Thon, M.R., Weimann, A., Damm, U., Dallery, J.F., Hainaut, M., Henrissat, B., Lespinet, O., Sacristan, S., Van Themaat, E.V.L., Kemen, E., Mchardy, A.C., Schulze-Lefert, P., and O’Connell, R.J. (2016). Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi. Nature Communications 7:11362. DOI: 10.1038/ncomms11362
